Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NcanP55066 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NcanP55066 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NcanP55066 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.83□□□□□ -0.36
NcanP55066 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NcanP55066 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NcanP55066 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NcanP55066 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.82□□□□□ -0.36
NcanP55066 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Gm7150-201ENSMUST00000122032 981 ntBASIC12.82□□□□□ -0.36
NcanP55066 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NcanP55066 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.82□□□□□ -0.36
NcanP55066 Gm24248-201ENSMUST00000157321 322 ntBASIC12.82□□□□□ -0.36
NcanP55066 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.82□□□□□ -0.36
NcanP55066 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.82□□□□□ -0.36
NcanP55066 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.82□□□□□ -0.36
NcanP55066 Gm37981-201ENSMUST00000194280 535 ntBASIC12.82□□□□□ -0.36
NcanP55066 Gm43852-201ENSMUST00000202098 917 ntBASIC12.82□□□□□ -0.36
NcanP55066 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC12.82□□□□□ -0.36
NcanP55066 Gm6390-201ENSMUST00000215034 589 ntBASIC12.82□□□□□ -0.36
NcanP55066 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NcanP55066 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.82□□□□□ -0.36
NcanP55066 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NcanP55066 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.81□□□□□ -0.36
NcanP55066 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.81□□□□□ -0.36
NcanP55066 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
NcanP55066 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
NcanP55066 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.81□□□□□ -0.36
NcanP55066 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.81□□□□□ -0.36
NcanP55066 Gm18776-201ENSMUST00000188833 654 ntBASIC12.81□□□□□ -0.36
NcanP55066 Gm37852-201ENSMUST00000193027 350 ntBASIC12.81□□□□□ -0.36
NcanP55066 Gm38117-201ENSMUST00000194653 939 ntBASIC12.81□□□□□ -0.36
NcanP55066 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Gm18561-201ENSMUST00000206027 804 ntBASIC12.81□□□□□ -0.36
NcanP55066 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms