Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.25□□□□□ -0.45
Fdft1P53798 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Map1b-203ENSMUST00000223725 2669 ntBASIC12.24□□□□□ -0.45
Fdft1P53798 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Snora78-201ENSMUST00000158630 128 ntBASIC12.24□□□□□ -0.45
Fdft1P53798 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fdft1P53798 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Fdft1P53798 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.24□□□□□ -0.45
Fdft1P53798 Gm45930-201ENSMUST00000221330 292 ntBASIC12.24□□□□□ -0.45
Fdft1P53798 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Fdft1P53798 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.24□□□□□ -0.45
Fdft1P53798 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fdft1P53798 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Fdft1P53798 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Fdft1P53798 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fdft1P53798 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fdft1P53798 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.23□□□□□ -0.45
Fdft1P53798 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Fdft1P53798 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.23□□□□□ -0.45
Fdft1P53798 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Gm24548-201ENSMUST00000158650 108 ntBASIC12.23□□□□□ -0.45
Fdft1P53798 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Fdft1P53798 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.23□□□□□ -0.45
Fdft1P53798 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.23□□□□□ -0.45
Fdft1P53798 Gm27243-201ENSMUST00000183964 521 ntBASIC12.23□□□□□ -0.45
Fdft1P53798 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.23□□□□□ -0.45
Fdft1P53798 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.23□□□□□ -0.45
Fdft1P53798 Gm6007-201ENSMUST00000208170 823 ntBASIC12.23□□□□□ -0.45
Fdft1P53798 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Fdft1P53798 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Fdft1P53798 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fdft1P53798 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.22□□□□□ -0.45
Fdft1P53798 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fdft1P53798 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms