Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.51□□□□□ -0.41
SftpbP50405 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.51□□□□□ -0.41
SftpbP50405 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SftpbP50405 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.51□□□□□ -0.41
SftpbP50405 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.51□□□□□ -0.41
SftpbP50405 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SftpbP50405 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SftpbP50405 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SftpbP50405 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.5□□□□□ -0.41
SftpbP50405 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SftpbP50405 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SftpbP50405 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
SftpbP50405 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SftpbP50405 Gm9083-201ENSMUST00000120423 819 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Gm8738-201ENSMUST00000172606 329 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Gm4034-201ENSMUST00000187674 480 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Gm18304-201ENSMUST00000189162 546 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Gm44405-201ENSMUST00000198952 126 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Gm18584-201ENSMUST00000203098 964 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Gm40466-201ENSMUST00000212174 422 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SftpbP50405 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SftpbP50405 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.5□□□□□ -0.41
SftpbP50405 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SftpbP50405 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpbP50405 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.49□□□□□ -0.41
SftpbP50405 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SftpbP50405 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SftpbP50405 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SftpbP50405 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.49□□□□□ -0.41
SftpbP50405 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SftpbP50405 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SftpbP50405 Gm6222-202ENSMUST00000182143 629 ntBASIC12.49□□□□□ -0.41
SftpbP50405 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.49□□□□□ -0.41
SftpbP50405 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SftpbP50405 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.49□□□□□ -0.41
SftpbP50405 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SftpbP50405 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.49□□□□□ -0.41
SftpbP50405 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.48□□□□□ -0.41
SftpbP50405 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SftpbP50405 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.48□□□□□ -0.41
SftpbP50405 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SftpbP50405 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms