Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm14165-201ENSMUST00000121456 952 ntBASIC12.62□□□□□ -0.39
HttP42859 Gm21778-201ENSMUST00000178779 471 ntBASIC12.62□□□□□ -0.39
HttP42859 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.62□□□□□ -0.39
HttP42859 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.62□□□□□ -0.39
HttP42859 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HttP42859 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.62□□□□□ -0.39
HttP42859 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Gm7572-201ENSMUST00000182616 766 ntBASIC12.62□□□□□ -0.39
HttP42859 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
HttP42859 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HttP42859 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.61□□□□□ -0.39
HttP42859 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
HttP42859 Gm13422-201ENSMUST00000118834 504 ntBASIC12.61□□□□□ -0.39
HttP42859 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC12.61□□□□□ -0.39
HttP42859 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.61□□□□□ -0.39
HttP42859 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.61□□□□□ -0.39
HttP42859 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HttP42859 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.61□□□□□ -0.39
HttP42859 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.61□□□□□ -0.39
HttP42859 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.61□□□□□ -0.39
HttP42859 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HttP42859 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HttP42859 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HttP42859 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HttP42859 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HttP42859 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HttP42859 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HttP42859 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.6□□□□□ -0.39
HttP42859 Gm8019-201ENSMUST00000119317 587 ntBASIC12.6□□□□□ -0.39
HttP42859 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.6□□□□□ -0.39
HttP42859 Gm8255-201ENSMUST00000218693 305 ntBASIC12.6□□□□□ -0.39
HttP42859 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HttP42859 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.6□□□□□ -0.39
HttP42859 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.6□□□□□ -0.39
HttP42859 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.6□□□□□ -0.39
HttP42859 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
HttP42859 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.6□□□□□ -0.39
HttP42859 Gm23647-201ENSMUST00000175042 109 ntBASIC12.6□□□□□ -0.39
HttP42859 Rn5s-201ENSMUST00000177555 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm25872-201ENSMUST00000177784 100 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm22109-201ENSMUST00000177995 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm22291-201ENSMUST00000178027 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm23284-201ENSMUST00000178069 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm25018-201ENSMUST00000179081 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms