Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.53□□□□□ -0.4
Mmp13P33435 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.53□□□□□ -0.4
Mmp13P33435 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Mmp13P33435 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.53□□□□□ -0.4
Mmp13P33435 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.53□□□□□ -0.4
Mmp13P33435 Gm12502-201ENSMUST00000120197 444 ntBASIC12.53□□□□□ -0.4
Mmp13P33435 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.53□□□□□ -0.4
Mmp13P33435 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm9022-201ENSMUST00000182482 992 ntBASIC12.53□□□□□ -0.4
Mmp13P33435 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.53□□□□□ -0.4
Mmp13P33435 Gm5781-201ENSMUST00000219792 443 ntBASIC12.53□□□□□ -0.4
Mmp13P33435 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Mmp13P33435 Olfr582-201ENSMUST00000098212 960 ntBASIC12.53□□□□□ -0.4
Mmp13P33435 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Mmp13P33435 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp13P33435 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Mmp13P33435 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Mmp13P33435 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.52□□□□□ -0.4
Mmp13P33435 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.52□□□□□ -0.4
Mmp13P33435 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.52□□□□□ -0.4
Mmp13P33435 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Mmp13P33435 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp13P33435 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Mmp13P33435 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Mmp13P33435 Gm8738-201ENSMUST00000172606 329 ntBASIC12.52□□□□□ -0.41
Mmp13P33435 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.52□□□□□ -0.41
Mmp13P33435 Gm3890-201ENSMUST00000182416 207 ntBASIC12.52□□□□□ -0.41
Mmp13P33435 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.52□□□□□ -0.41
Mmp13P33435 Gm5904-201ENSMUST00000210286 865 ntBASIC12.52□□□□□ -0.41
Mmp13P33435 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Gm24526-201ENSMUST00000082921 158 ntBASIC12.52□□□□□ -0.41
Mmp13P33435 Gm24136-201ENSMUST00000083374 165 ntBASIC12.52□□□□□ -0.41
Mmp13P33435 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Mmp13P33435 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Mmp13P33435 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.52□□□□□ -0.41
Mmp13P33435 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Mmp13P33435 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Mmp13P33435 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp13P33435 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.52□□□□□ -0.41
Mmp13P33435 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Mmp13P33435 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Mmp13P33435 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Mmp13P33435 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms