Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rgr-203ENSMUST00000225070 4704 ntBASIC11.27□□□□□ -0.61
Nedd8P29595 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Nedd8P29595 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nedd8P29595 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nedd8P29595 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Nedd8P29595 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.26□□□□□ -0.61
Nedd8P29595 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Nedd8P29595 Gm15693-201ENSMUST00000120470 637 ntBASIC11.26□□□□□ -0.61
Nedd8P29595 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.26□□□□□ -0.61
Nedd8P29595 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nedd8P29595 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.26□□□□□ -0.61
Nedd8P29595 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.26□□□□□ -0.61
Nedd8P29595 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nedd8P29595 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.26□□□□□ -0.61
Nedd8P29595 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.26□□□□□ -0.61
Nedd8P29595 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.26□□□□□ -0.61
Nedd8P29595 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Nedd8P29595 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nedd8P29595 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Nedd8P29595 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.25□□□□□ -0.61
Nedd8P29595 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.25□□□□□ -0.61
Nedd8P29595 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nedd8P29595 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nedd8P29595 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nedd8P29595 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nedd8P29595 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nedd8P29595 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nedd8P29595 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nedd8P29595 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.25□□□□□ -0.61
Nedd8P29595 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nedd8P29595 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.25□□□□□ -0.61
Nedd8P29595 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Nedd8P29595 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nedd8P29595 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Nedd8P29595 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nedd8P29595 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.24□□□□□ -0.61
Nedd8P29595 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nedd8P29595 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms