Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.02□□□□□ -0.17
Vcam1P29533 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.01□□□□□ -0.17
Vcam1P29533 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vcam1P29533 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vcam1P29533 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vcam1P29533 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.01□□□□□ -0.17
Vcam1P29533 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Gm12029-201ENSMUST00000120073 832 ntBASIC14.01□□□□□ -0.17
Vcam1P29533 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.01□□□□□ -0.17
Vcam1P29533 Gm12208-201ENSMUST00000122004 163 ntBASIC14.01□□□□□ -0.17
Vcam1P29533 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.01□□□□□ -0.17
Vcam1P29533 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Vcam1P29533 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.01□□□□□ -0.17
Vcam1P29533 Gm5714-201ENSMUST00000197343 566 ntBASIC14.01□□□□□ -0.17
Vcam1P29533 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.01□□□□□ -0.17
Vcam1P29533 Gm6867-201ENSMUST00000219165 425 ntBASIC14.01□□□□□ -0.17
Vcam1P29533 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.01□□□□□ -0.17
Vcam1P29533 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcam1P29533 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Vcam1P29533 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Vcam1P29533 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vcam1P29533 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14□□□□□ -0.17
Vcam1P29533 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Gm44758-201ENSMUST00000206096 2068 ntBASIC14□□□□□ -0.17
Vcam1P29533 Gm27196-201ENSMUST00000184787 2582 ntBASIC14□□□□□ -0.17
Vcam1P29533 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vcam1P29533 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vcam1P29533 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vcam1P29533 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Vcam1P29533 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14□□□□□ -0.17
Vcam1P29533 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Gm8815-201ENSMUST00000173809 620 ntBASIC14□□□□□ -0.17
Vcam1P29533 AC113082.1-201ENSMUST00000217324 327 ntBASIC14□□□□□ -0.17
Vcam1P29533 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 CT009713.8-202ENSMUST00000224732 385 ntBASIC14□□□□□ -0.17
Vcam1P29533 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Gm8155-201ENSMUST00000216363 1612 ntBASIC14□□□□□ -0.17
Vcam1P29533 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Vcam1P29533 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vcam1P29533 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vcam1P29533 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Vcam1P29533 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Gm8731-201ENSMUST00000118088 412 ntBASIC13.99□□□□□ -0.17
Vcam1P29533 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vcam1P29533 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.99□□□□□ -0.17
Vcam1P29533 Gm9540-201ENSMUST00000188230 478 ntBASIC13.99□□□□□ -0.17
Vcam1P29533 Gm44124-201ENSMUST00000204159 472 ntBASIC13.99□□□□□ -0.17
Vcam1P29533 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Vcam1P29533 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.99□□□□□ -0.17
Vcam1P29533 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms