Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Mmp3P28862 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12616-201ENSMUST00000118594 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm15432-201ENSMUST00000121106 195 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm10051-201ENSMUST00000145209 414 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.07□□□□□ -0.32
Mmp3P28862 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12624-201ENSMUST00000177615 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12621-201ENSMUST00000177760 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12615-201ENSMUST00000177970 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12622-201ENSMUST00000177975 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12627-201ENSMUST00000178412 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12625-201ENSMUST00000179122 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12614-201ENSMUST00000179586 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm12613-201ENSMUST00000180323 382 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gm8100-201ENSMUST00000182906 988 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.07□□□□□ -0.32
Mmp3P28862 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Mmp3P28862 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.07□□□□□ -0.32
Mmp3P28862 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.07□□□□□ -0.32
Mmp3P28862 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Mmp3P28862 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Mmp3P28862 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Mmp3P28862 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Mmp3P28862 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.06□□□□□ -0.32
Mmp3P28862 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Gm14724-201ENSMUST00000118400 537 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Gm8199-201ENSMUST00000121323 823 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Gm23085-201ENSMUST00000157849 293 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Gm9550-201ENSMUST00000161130 862 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.06□□□□□ -0.32
Mmp3P28862 Gm28686-201ENSMUST00000187404 609 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Gm18893-201ENSMUST00000198416 943 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Gm9797-202ENSMUST00000218003 294 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.06□□□□□ -0.32
Mmp3P28862 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.06□□□□□ -0.32
Mmp3P28862 Gm5705-201ENSMUST00000066241 711 ntBASIC13.06□□□□□ -0.32
Mmp3P28862 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Mmp3P28862 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Mmp3P28862 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.05□□□□□ -0.32
Mmp3P28862 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Gm24891-201ENSMUST00000104391 136 ntBASIC13.05□□□□□ -0.32
Mmp3P28862 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Mmp3P28862 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Mmp3P28862 Gm8566-201ENSMUST00000120174 465 ntBASIC13.05□□□□□ -0.32
Mmp3P28862 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.05□□□□□ -0.32
Mmp3P28862 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms