Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pde6aP27664 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pde6aP27664 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.17□□□□□ -0.14
Pde6aP27664 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.17□□□□□ -0.14
Pde6aP27664 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pde6aP27664 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pde6aP27664 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Map1b-203ENSMUST00000223725 2669 ntBASIC14.16□□□□□ -0.14
Pde6aP27664 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pde6aP27664 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.16□□□□□ -0.14
Pde6aP27664 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.16□□□□□ -0.14
Pde6aP27664 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pde6aP27664 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.16□□□□□ -0.14
Pde6aP27664 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.16□□□□□ -0.14
Pde6aP27664 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pde6aP27664 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.16□□□□□ -0.14
Pde6aP27664 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
Pde6aP27664 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.16□□□□□ -0.14
Pde6aP27664 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pde6aP27664 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6aP27664 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pde6aP27664 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pde6aP27664 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Pde6aP27664 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.15□□□□□ -0.14
Pde6aP27664 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.15□□□□□ -0.14
Pde6aP27664 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.15□□□□□ -0.14
Pde6aP27664 Gm44262-201ENSMUST00000204969 372 ntBASIC14.15□□□□□ -0.14
Pde6aP27664 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.15□□□□□ -0.14
Pde6aP27664 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.15□□□□□ -0.14
Pde6aP27664 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.15□□□□□ -0.14
Pde6aP27664 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Matn2-203ENSMUST00000226766 3252 ntBASIC14.15□□□□□ -0.14
Pde6aP27664 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms