Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.6□□□□□ -0.39
Nfkb1P25799 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.6□□□□□ -0.39
Nfkb1P25799 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Gm17040-202ENSMUST00000170597 889 ntBASIC12.6□□□□□ -0.39
Nfkb1P25799 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.6□□□□□ -0.39
Nfkb1P25799 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Nfkb1P25799 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.6□□□□□ -0.39
Nfkb1P25799 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.6□□□□□ -0.39
Nfkb1P25799 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.6□□□□□ -0.39
Nfkb1P25799 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nfkb1P25799 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nfkb1P25799 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nfkb1P25799 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nfkb1P25799 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Gm15711-201ENSMUST00000118889 535 ntBASIC12.59□□□□□ -0.39
Nfkb1P25799 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.59□□□□□ -0.39
Nfkb1P25799 Gm12266-201ENSMUST00000120311 962 ntBASIC12.59□□□□□ -0.39
Nfkb1P25799 Gm11434-201ENSMUST00000122379 629 ntBASIC12.59□□□□□ -0.39
Nfkb1P25799 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.59□□□□□ -0.39
Nfkb1P25799 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.59□□□□□ -0.39
Nfkb1P25799 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nfkb1P25799 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nfkb1P25799 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.59□□□□□ -0.39
Nfkb1P25799 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nfkb1P25799 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.58□□□□□ -0.39
Nfkb1P25799 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.58□□□□□ -0.39
Nfkb1P25799 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Gm23949-201ENSMUST00000104027 127 ntBASIC12.58□□□□□ -0.4
Nfkb1P25799 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nfkb1P25799 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.58□□□□□ -0.4
Nfkb1P25799 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.58□□□□□ -0.4
Nfkb1P25799 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.58□□□□□ -0.4
Nfkb1P25799 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms