Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
BdnfP21237 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
BdnfP21237 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
BdnfP21237 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.77□□□□□ -0.52
BdnfP21237 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
BdnfP21237 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
BdnfP21237 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.77□□□□□ -0.52
BdnfP21237 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
BdnfP21237 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
BdnfP21237 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
BdnfP21237 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
BdnfP21237 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
BdnfP21237 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.77□□□□□ -0.53
BdnfP21237 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Gm12384-201ENSMUST00000119228 919 ntBASIC11.77□□□□□ -0.53
BdnfP21237 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.77□□□□□ -0.53
BdnfP21237 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.77□□□□□ -0.53
BdnfP21237 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.77□□□□□ -0.53
BdnfP21237 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
BdnfP21237 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
BdnfP21237 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.77□□□□□ -0.53
BdnfP21237 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BdnfP21237 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.76□□□□□ -0.53
BdnfP21237 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.76□□□□□ -0.53
BdnfP21237 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
BdnfP21237 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.76□□□□□ -0.53
BdnfP21237 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.76□□□□□ -0.53
BdnfP21237 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
BdnfP21237 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
BdnfP21237 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.76□□□□□ -0.53
BdnfP21237 Gm16177-201ENSMUST00000120728 718 ntBASIC11.76□□□□□ -0.53
BdnfP21237 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.76□□□□□ -0.53
BdnfP21237 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC11.76□□□□□ -0.53
BdnfP21237 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
BdnfP21237 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.76□□□□□ -0.53
BdnfP21237 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.76□□□□□ -0.53
BdnfP21237 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BdnfP21237 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
BdnfP21237 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms