Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
TP20293 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.56□□□□□ -0.56
TP20293 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TP20293 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.56□□□□□ -0.56
TP20293 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.56□□□□□ -0.56
TP20293 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.56□□□□□ -0.56
TP20293 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.56□□□□□ -0.56
TP20293 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.56□□□□□ -0.56
TP20293 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Gm14760-201ENSMUST00000121831 999 ntBASIC11.56□□□□□ -0.56
TP20293 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.56□□□□□ -0.56
TP20293 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.56□□□□□ -0.56
TP20293 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
TP20293 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.56□□□□□ -0.56
TP20293 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
TP20293 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
TP20293 Olfr284-202ENSMUST00000206647 966 ntBASIC11.56□□□□□ -0.56
TP20293 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.56□□□□□ -0.56
TP20293 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
TP20293 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.56□□□□□ -0.56
TP20293 Gm7399-201ENSMUST00000032395 858 ntBASIC11.56□□□□□ -0.56
TP20293 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.56□□□□□ -0.56
TP20293 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
TP20293 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
TP20293 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.56□□□□□ -0.56
TP20293 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.56□□□□□ -0.56
TP20293 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TP20293 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.55□□□□□ -0.56
TP20293 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TP20293 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.55□□□□□ -0.56
TP20293 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
TP20293 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TP20293 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Gm24231-201ENSMUST00000104315 133 ntBASIC11.55□□□□□ -0.56
TP20293 Gm12058-201ENSMUST00000118614 437 ntBASIC11.55□□□□□ -0.56
TP20293 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.55□□□□□ -0.56
TP20293 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.55□□□□□ -0.56
TP20293 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.55□□□□□ -0.56
TP20293 Rmrp-201ENSMUST00000157463 271 ntBASIC11.55□□□□□ -0.56
TP20293 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TP20293 Gm29396-201ENSMUST00000185659 716 ntBASIC11.55□□□□□ -0.56
TP20293 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.55□□□□□ -0.56
TP20293 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.55□□□□□ -0.56
TP20293 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.55□□□□□ -0.56
TP20293 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.55□□□□□ -0.56
TP20293 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.55□□□□□ -0.56
TP20293 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
TP20293 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.55□□□□□ -0.56
TP20293 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.55□□□□□ -0.56
TP20293 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.55□□□□□ -0.56
TP20293 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TP20293 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms