Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.4□□□□□ -0.42
VimP20152 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
VimP20152 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
VimP20152 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
VimP20152 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.4□□□□□ -0.43
VimP20152 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
VimP20152 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
VimP20152 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.39□□□□□ -0.43
VimP20152 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.39□□□□□ -0.43
VimP20152 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.39□□□□□ -0.43
VimP20152 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.39□□□□□ -0.43
VimP20152 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VimP20152 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VimP20152 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.39□□□□□ -0.43
VimP20152 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.39□□□□□ -0.43
VimP20152 Gm38294-201ENSMUST00000192831 381 ntBASIC12.39□□□□□ -0.43
VimP20152 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.39□□□□□ -0.43
VimP20152 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.39□□□□□ -0.43
VimP20152 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.39□□□□□ -0.43
VimP20152 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.39□□□□□ -0.43
VimP20152 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VimP20152 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.38□□□□□ -0.43
VimP20152 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.38□□□□□ -0.43
VimP20152 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
VimP20152 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VimP20152 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VimP20152 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.38□□□□□ -0.43
VimP20152 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
VimP20152 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.38□□□□□ -0.43
VimP20152 Gm6888-201ENSMUST00000221983 706 ntBASIC12.38□□□□□ -0.43
VimP20152 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.38□□□□□ -0.43
VimP20152 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.38□□□□□ -0.43
VimP20152 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VimP20152 Btrc-209ENSMUST00000224478 2194 ntBASIC12.37□□□□□ -0.43
VimP20152 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
VimP20152 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VimP20152 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
VimP20152 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
VimP20152 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VimP20152 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
VimP20152 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.37□□□□□ -0.43
VimP20152 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
VimP20152 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
VimP20152 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
VimP20152 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.37□□□□□ -0.43
VimP20152 Gm16372-201ENSMUST00000073088 450 ntBASIC12.37□□□□□ -0.43
VimP20152 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms