Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Dopey2-207ENSMUST00000227156 7340 ntBASIC10□□□□□ -0.81
Sdc1P18828 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Sdc1P18828 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Sdc1P18828 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sdc1P18828 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Sdc1P18828 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm24231-201ENSMUST00000104315 133 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.99□□□□□ -0.81
Sdc1P18828 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm6415-201ENSMUST00000118488 348 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Gm11524-201ENSMUST00000119349 807 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Gm15703-201ENSMUST00000120250 880 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.99□□□□□ -0.81
Sdc1P18828 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Sdc1P18828 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sdc1P18828 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sdc1P18828 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm8420-201ENSMUST00000097103 598 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Sdc1P18828 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sdc1P18828 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Sdc1P18828 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.99□□□□□ -0.81
Sdc1P18828 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sdc1P18828 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.99□□□□□ -0.81
Sdc1P18828 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sdc1P18828 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.98□□□□□ -0.81
Sdc1P18828 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.98□□□□□ -0.81
Sdc1P18828 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Sdc1P18828 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.98□□□□□ -0.81
Sdc1P18828 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Sdc1P18828 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Sdc1P18828 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Sdc1P18828 Gm11439-201ENSMUST00000118598 409 ntBASIC9.98□□□□□ -0.81
Sdc1P18828 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.98□□□□□ -0.81
Sdc1P18828 Gm12260-201ENSMUST00000122447 411 ntBASIC9.98□□□□□ -0.81
Sdc1P18828 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.98□□□□□ -0.81
Sdc1P18828 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.98□□□□□ -0.81
Sdc1P18828 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sdc1P18828 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.98□□□□□ -0.81
Sdc1P18828 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.98□□□□□ -0.81
Sdc1P18828 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.98□□□□□ -0.81
Sdc1P18828 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sdc1P18828 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sdc1P18828 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.98□□□□□ -0.81
Sdc1P18828 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms