Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mir7076-201ENSMUST00000183519 74 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Gm27910-201ENSMUST00000185004 107 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Gm44882-201ENSMUST00000205702 802 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl3P10855 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl3P10855 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.77□□□□□ -0.68
Ccl3P10855 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl3P10855 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl3P10855 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl3P10855 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl3P10855 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl3P10855 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.77□□□□□ -0.68
Ccl3P10855 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Gm15352-201ENSMUST00000118696 270 ntBASIC10.77□□□□□ -0.69
Ccl3P10855 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccl3P10855 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccl3P10855 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.77□□□□□ -0.69
Ccl3P10855 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.77□□□□□ -0.69
Ccl3P10855 Gm34023-201ENSMUST00000195539 217 ntBASIC10.77□□□□□ -0.69
Ccl3P10855 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccl3P10855 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Ccl3P10855 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccl3P10855 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccl3P10855 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccl3P10855 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.77□□□□□ -0.69
Ccl3P10855 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Ccl3P10855 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Ccl3P10855 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccl3P10855 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl3P10855 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.76□□□□□ -0.69
Ccl3P10855 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Ccl3P10855 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Gm15004-201ENSMUST00000119192 630 ntBASIC10.76□□□□□ -0.69
Ccl3P10855 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.76□□□□□ -0.69
Ccl3P10855 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccl3P10855 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccl3P10855 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccl3P10855 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccl3P10855 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccl3P10855 Gm29155-201ENSMUST00000185910 269 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms