Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Sod1P08228 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sod1P08228 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sod1P08228 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.44□□□□□ -0.58
Sod1P08228 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Sod1P08228 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Gm12899-201ENSMUST00000120565 551 ntBASIC11.44□□□□□ -0.58
Sod1P08228 Gm11836-201ENSMUST00000121022 441 ntBASIC11.44□□□□□ -0.58
Sod1P08228 Mir1901-201ENSMUST00000122616 78 ntBASIC11.44□□□□□ -0.58
Sod1P08228 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.44□□□□□ -0.58
Sod1P08228 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.44□□□□□ -0.58
Sod1P08228 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Gm21092-201ENSMUST00000178995 955 ntBASIC11.44□□□□□ -0.58
Sod1P08228 Gm4654-201ENSMUST00000183305 982 ntBASIC11.44□□□□□ -0.58
Sod1P08228 Gm37905-201ENSMUST00000195310 341 ntBASIC11.44□□□□□ -0.58
Sod1P08228 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.44□□□□□ -0.58
Sod1P08228 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Sod1P08228 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.44□□□□□ -0.58
Sod1P08228 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sod1P08228 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Gm11451-201ENSMUST00000118946 630 ntBASIC11.43□□□□□ -0.58
Sod1P08228 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.43□□□□□ -0.58
Sod1P08228 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sod1P08228 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.43□□□□□ -0.58
Sod1P08228 Gm24844-201ENSMUST00000158679 127 ntBASIC11.43□□□□□ -0.58
Sod1P08228 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.43□□□□□ -0.58
Sod1P08228 Gm38210-201ENSMUST00000191944 809 ntBASIC11.43□□□□□ -0.58
Sod1P08228 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.43□□□□□ -0.58
Sod1P08228 Gm34023-201ENSMUST00000195539 217 ntBASIC11.43□□□□□ -0.58
Sod1P08228 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.43□□□□□ -0.58
Sod1P08228 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.43□□□□□ -0.58
Sod1P08228 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sod1P08228 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sod1P08228 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Sod1P08228 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sod1P08228 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms