Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ApoeP08226 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
ApoeP08226 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.58□□□□□ -0.55
ApoeP08226 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.58□□□□□ -0.56
ApoeP08226 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
ApoeP08226 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.58□□□□□ -0.56
ApoeP08226 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ApoeP08226 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ApoeP08226 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ApoeP08226 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ApoeP08226 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.58□□□□□ -0.56
ApoeP08226 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ApoeP08226 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.58□□□□□ -0.56
ApoeP08226 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
ApoeP08226 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
ApoeP08226 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ApoeP08226 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.58□□□□□ -0.56
ApoeP08226 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.57□□□□□ -0.56
ApoeP08226 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.57□□□□□ -0.56
ApoeP08226 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.57□□□□□ -0.56
ApoeP08226 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.57□□□□□ -0.56
ApoeP08226 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.57□□□□□ -0.56
ApoeP08226 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.57□□□□□ -0.56
ApoeP08226 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.57□□□□□ -0.56
ApoeP08226 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.57□□□□□ -0.56
ApoeP08226 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
ApoeP08226 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.57□□□□□ -0.56
ApoeP08226 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
ApoeP08226 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
ApoeP08226 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ApoeP08226 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
ApoeP08226 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms