Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.96□□□□□ -0.33
TnfP06804 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TnfP06804 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
TnfP06804 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TnfP06804 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.96□□□□□ -0.33
TnfP06804 Gm14247-201ENSMUST00000120950 237 ntBASIC12.96□□□□□ -0.33
TnfP06804 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
TnfP06804 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.96□□□□□ -0.33
TnfP06804 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TnfP06804 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.96□□□□□ -0.33
TnfP06804 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Gm26448-201ENSMUST00000082446 203 ntBASIC12.96□□□□□ -0.33
TnfP06804 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TnfP06804 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.96□□□□□ -0.33
TnfP06804 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.96□□□□□ -0.34
TnfP06804 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
TnfP06804 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
TnfP06804 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TnfP06804 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TnfP06804 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.95□□□□□ -0.34
TnfP06804 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
TnfP06804 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.95□□□□□ -0.34
TnfP06804 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TnfP06804 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Gm26286-201ENSMUST00000104166 134 ntBASIC12.95□□□□□ -0.34
TnfP06804 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TnfP06804 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
TnfP06804 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Gm15515-201ENSMUST00000117827 822 ntBASIC12.95□□□□□ -0.34
TnfP06804 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.95□□□□□ -0.34
TnfP06804 Gm11450-201ENSMUST00000121144 333 ntBASIC12.95□□□□□ -0.34
TnfP06804 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.95□□□□□ -0.34
TnfP06804 Gm25881-201ENSMUST00000157783 103 ntBASIC12.95□□□□□ -0.34
TnfP06804 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
TnfP06804 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.95□□□□□ -0.34
TnfP06804 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.95□□□□□ -0.34
TnfP06804 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.95□□□□□ -0.34
TnfP06804 Gm807-202ENSMUST00000224929 408 ntBASIC12.95□□□□□ -0.34
TnfP06804 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TnfP06804 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TnfP06804 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TnfP06804 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.95□□□□□ -0.34
TnfP06804 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.95□□□□□ -0.34
TnfP06804 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
TnfP06804 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TnfP06804 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TnfP06804 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms