Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm22133-201ENSMUST00000102082 109 ntBASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm26286-201ENSMUST00000104166 134 ntBASIC12.05□□□□□ -0.48
Hoxa4P06798 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm12036-201ENSMUST00000120008 530 ntBASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm15610-201ENSMUST00000120584 195 ntBASIC12.05□□□□□ -0.48
Hoxa4P06798 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm37666-201ENSMUST00000194110 866 ntBASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gm17812-201ENSMUST00000204935 318 ntBASIC12.05□□□□□ -0.48
Hoxa4P06798 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.05□□□□□ -0.48
Hoxa4P06798 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.04□□□□□ -0.48
Hoxa4P06798 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.04□□□□□ -0.48
Hoxa4P06798 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm18893-201ENSMUST00000198416 943 ntBASIC12.04□□□□□ -0.48
Hoxa4P06798 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm4607-201ENSMUST00000206649 577 ntBASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.04□□□□□ -0.48
Hoxa4P06798 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.04□□□□□ -0.48
Hoxa4P06798 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.04□□□□□ -0.48
Hoxa4P06798 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa4P06798 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa4P06798 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms