Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
CfdP03953 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
CfdP03953 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.21□□□□□ -0.77
CfdP03953 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.21□□□□□ -0.77
CfdP03953 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
CfdP03953 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.21□□□□□ -0.77
CfdP03953 Gm43514-201ENSMUST00000198852 424 ntBASIC10.21□□□□□ -0.77
CfdP03953 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.21□□□□□ -0.77
CfdP03953 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.21□□□□□ -0.77
CfdP03953 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.21□□□□□ -0.77
CfdP03953 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.21□□□□□ -0.77
CfdP03953 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.21□□□□□ -0.77
CfdP03953 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
CfdP03953 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.21□□□□□ -0.77
CfdP03953 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CfdP03953 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
CfdP03953 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
CfdP03953 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
CfdP03953 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
CfdP03953 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
CfdP03953 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.21□□□□□ -0.78
CfdP03953 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CfdP03953 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
CfdP03953 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.2□□□□□ -0.78
CfdP03953 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
CfdP03953 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.2□□□□□ -0.78
CfdP03953 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.2□□□□□ -0.78
CfdP03953 Gm11637-201ENSMUST00000120601 592 ntBASIC10.2□□□□□ -0.78
CfdP03953 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.2□□□□□ -0.78
CfdP03953 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Gm23119-201ENSMUST00000158610 140 ntBASIC10.2□□□□□ -0.78
CfdP03953 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
CfdP03953 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.2□□□□□ -0.78
CfdP03953 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Gm27702-201ENSMUST00000184512 56 ntBASIC10.2□□□□□ -0.78
CfdP03953 Gm2213-201ENSMUST00000197485 688 ntBASIC10.2□□□□□ -0.78
CfdP03953 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.2□□□□□ -0.78
CfdP03953 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
CfdP03953 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Gm32025-201ENSMUST00000217960 307 ntBASIC10.2□□□□□ -0.78
CfdP03953 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.2□□□□□ -0.78
CfdP03953 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.2□□□□□ -0.78
CfdP03953 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CfdP03953 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
CfdP03953 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CfdP03953 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CfdP03953 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
CfdP03953 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms