Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm26461-201ENSMUST00000175064 290 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Hoxa3P02831 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm16505-201ENSMUST00000179981 232 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm2260-201ENSMUST00000184965 657 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm12314-201ENSMUST00000118104 538 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm16570-201ENSMUST00000161951 436 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm25700-201ENSMUST00000177693 110 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm27023-201ENSMUST00000182372 285 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm45224-201ENSMUST00000208203 414 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm5363-201ENSMUST00000211927 938 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.29□□□□□ -0.76
Hoxa3P02831 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hoxa3P02831 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.29□□□□□ -0.76
Hoxa3P02831 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms