Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm10226O88253 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Gm10226O88253 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10226O88253 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Gm10226O88253 Gm15610-201ENSMUST00000120584 195 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Gm10226O88253 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Mir7677-201ENSMUST00000184226 67 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Mir6927-201ENSMUST00000184494 71 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Gm8956-201ENSMUST00000203939 825 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
Gm10226O88253 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Gm270-201ENSMUST00000223010 976 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.41□□□□□ -0.9
Gm10226O88253 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Gm10226O88253 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.41□□□□□ -0.9
Gm10226O88253 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Gm10226O88253 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10226O88253 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm10226O88253 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.4□□□□□ -0.9
Gm10226O88253 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Gm10226O88253 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Gm10226O88253 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Gm10226O88253 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm10226O88253 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Gm10226O88253 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm10226O88253 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
Gm10226O88253 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Gm10226O88253 Gm5706-201ENSMUST00000181525 993 ntBASIC9.4□□□□□ -0.9
Gm10226O88253 Gm8343-201ENSMUST00000182705 994 ntBASIC9.4□□□□□ -0.9
Gm10226O88253 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Gm27390-201ENSMUST00000184516 176 ntBASIC9.4□□□□□ -0.9
Gm10226O88253 Gm43184-201ENSMUST00000197247 542 ntBASIC9.4□□□□□ -0.9
Gm10226O88253 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Gm10226O88253 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10226O88253 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Gm10226O88253 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms