Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarce1O54941 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.53□□□□□ -0.08
Smarce1O54941 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.53□□□□□ -0.08
Smarce1O54941 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarce1O54941 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smarce1O54941 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.52□□□□□ -0.08
Smarce1O54941 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Smarce1O54941 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Smarce1O54941 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Smarce1O54941 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Smarce1O54941 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarce1O54941 Gm23912-201ENSMUST00000104687 87 ntBASIC14.52□□□□□ -0.09
Smarce1O54941 Gm12036-201ENSMUST00000120008 530 ntBASIC14.52□□□□□ -0.09
Smarce1O54941 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.52□□□□□ -0.09
Smarce1O54941 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.52□□□□□ -0.09
Smarce1O54941 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.52□□□□□ -0.09
Smarce1O54941 Gm16379-201ENSMUST00000161469 348 ntBASIC14.52□□□□□ -0.09
Smarce1O54941 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Gm8762-201ENSMUST00000193486 339 ntBASIC14.52□□□□□ -0.09
Smarce1O54941 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Smarce1O54941 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Smarce1O54941 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Smarce1O54941 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarce1O54941 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.51□□□□□ -0.09
Smarce1O54941 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarce1O54941 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Gm40466-201ENSMUST00000212174 422 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Gm39404-201ENSMUST00000216350 313 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarce1O54941 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smarce1O54941 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.51□□□□□ -0.09
Smarce1O54941 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smarce1O54941 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarce1O54941 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarce1O54941 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms