Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.96□□□□□ -0.49
Npc1O35604 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Npc1O35604 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.96□□□□□ -0.49
Npc1O35604 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.96□□□□□ -0.49
Npc1O35604 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Gm14130-201ENSMUST00000118417 987 ntBASIC11.96□□□□□ -0.49
Npc1O35604 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.96□□□□□ -0.49
Npc1O35604 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Gm9630-201ENSMUST00000178304 885 ntBASIC11.96□□□□□ -0.49
Npc1O35604 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.96□□□□□ -0.49
Npc1O35604 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.96□□□□□ -0.49
Npc1O35604 Gm44651-201ENSMUST00000207343 372 ntBASIC11.96□□□□□ -0.49
Npc1O35604 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.96□□□□□ -0.49
Npc1O35604 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Npc1O35604 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.96□□□□□ -0.49
Npc1O35604 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.96□□□□□ -0.49
Npc1O35604 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.96□□□□□ -0.49
Npc1O35604 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npc1O35604 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.96□□□□□ -0.5
Npc1O35604 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Npc1O35604 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.96□□□□□ -0.5
Npc1O35604 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npc1O35604 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Npc1O35604 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Npc1O35604 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.95□□□□□ -0.5
Npc1O35604 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.95□□□□□ -0.5
Npc1O35604 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.95□□□□□ -0.5
Npc1O35604 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.95□□□□□ -0.5
Npc1O35604 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.95□□□□□ -0.5
Npc1O35604 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.95□□□□□ -0.5
Npc1O35604 Gm19187-201ENSMUST00000206781 892 ntBASIC11.95□□□□□ -0.5
Npc1O35604 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Npc1O35604 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.95□□□□□ -0.5
Npc1O35604 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npc1O35604 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.94□□□□□ -0.5
Npc1O35604 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npc1O35604 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Npc1O35604 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npc1O35604 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npc1O35604 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.94□□□□□ -0.5
Npc1O35604 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.94□□□□□ -0.5
Npc1O35604 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npc1O35604 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npc1O35604 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npc1O35604 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms