Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.2□□□□□ -0.46
Gm3139J3QK78 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.2□□□□□ -0.46
Gm3139J3QK78 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm3139J3QK78 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.19□□□□□ -0.46
Gm3139J3QK78 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm14208-201ENSMUST00000119645 678 ntBASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm7722-201ENSMUST00000120646 741 ntBASIC12.19□□□□□ -0.46
Gm3139J3QK78 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm27341-201ENSMUST00000183570 106 ntBASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.19□□□□□ -0.46
Gm3139J3QK78 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm5455-201ENSMUST00000058710 715 ntBASIC12.19□□□□□ -0.46
Gm3139J3QK78 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.19□□□□□ -0.46
Gm3139J3QK78 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Gm3139J3QK78 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm16570-201ENSMUST00000161951 436 ntBASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm5616-201ENSMUST00000165252 384 ntBASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm8741-201ENSMUST00000174736 384 ntBASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm28071-201ENSMUST00000190355 478 ntBASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm37466-201ENSMUST00000195692 652 ntBASIC12.18□□□□□ -0.46
Gm3139J3QK78 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3139J3QK78 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms