Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx1-1G3UXB3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gm14219-201ENSMUST00000120414 288 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gm11246-201ENSMUST00000120880 345 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gm43992-201ENSMUST00000204358 197 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 CT030645.3-201ENSMUST00000225483 1022 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 CT009600.2-201ENSMUST00000226638 481 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-1G3UXB3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-1G3UXB3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms