Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.66□□□□□ -0.06
Ube4aE9Q735 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Gm12029-201ENSMUST00000120073 832 ntBASIC14.65□□□□□ -0.06
Ube4aE9Q735 Gm7666-201ENSMUST00000146631 819 ntBASIC14.65□□□□□ -0.06
Ube4aE9Q735 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Gm4310-201ENSMUST00000177847 889 ntBASIC14.65□□□□□ -0.06
Ube4aE9Q735 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.65□□□□□ -0.06
Ube4aE9Q735 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.65□□□□□ -0.06
Ube4aE9Q735 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.65□□□□□ -0.06
Ube4aE9Q735 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.65□□□□□ -0.06
Ube4aE9Q735 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.65□□□□□ -0.06
Ube4aE9Q735 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm22144-201ENSMUST00000157402 102 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm17831-201ENSMUST00000205579 900 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm44545-201ENSMUST00000208262 746 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms