Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm26368-201ENSMUST00000157826 118 ntBASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Mir6941-201ENSMUST00000184711 59 ntBASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Gm18801-201ENSMUST00000186616 536 ntBASIC16.84■□□□□ 0.29
Scaf11E9PZM7 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf11E9PZM7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scaf11E9PZM7 Gm4900-201ENSMUST00000222046 1628 ntBASIC16.83■□□□□ 0.29
Scaf11E9PZM7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scaf11E9PZM7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.83■□□□□ 0.29
Scaf11E9PZM7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scaf11E9PZM7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scaf11E9PZM7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Gm6831-202ENSMUST00000213025 1673 ntBASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Gm45113-201ENSMUST00000207518 165 ntBASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Gm45527-201ENSMUST00000211052 774 ntBASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Gm43807-201ENSMUST00000200678 1781 ntBASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf11E9PZM7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Gm5513-201ENSMUST00000072982 1218 ntBASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Gm36970-201ENSMUST00000193688 1859 ntBASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf11E9PZM7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Gm14270-201ENSMUST00000118388 846 ntBASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Gm8574-201ENSMUST00000203207 924 ntBASIC16.81■□□□□ 0.28
Scaf11E9PZM7 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Gm30671-201ENSMUST00000214898 318 ntBASIC16.81■□□□□ 0.28
Scaf11E9PZM7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 BC106175-202ENSMUST00000219344 1213 ntBASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Gm26035-201ENSMUST00000083065 308 ntBASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf11E9PZM7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf11E9PZM7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf11E9PZM7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf11E9PZM7 Gm11500-201ENSMUST00000118237 601 ntBASIC16.8■□□□□ 0.28
Scaf11E9PZM7 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf11E9PZM7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms