Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm13600-201ENSMUST00000117949 744 ntBASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm17889-201ENSMUST00000198410 598 ntBASIC10.97□□□□□ -0.65
Shank1D3YZU1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.97□□□□□ -0.65
Shank1D3YZU1 Gm10288-201ENSMUST00000084614 537 ntBASIC10.97□□□□□ -0.65
Shank1D3YZU1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shank1D3YZU1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.96□□□□□ -0.65
Shank1D3YZU1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Gm25072-201ENSMUST00000175233 235 ntBASIC10.96□□□□□ -0.65
Shank1D3YZU1 Mir8115-201ENSMUST00000184992 119 ntBASIC10.96□□□□□ -0.65
Shank1D3YZU1 Gm28324-201ENSMUST00000187913 264 ntBASIC10.96□□□□□ -0.65
Shank1D3YZU1 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.96□□□□□ -0.65
Shank1D3YZU1 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shank1D3YZU1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 Gm24934-201ENSMUST00000103764 111 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Gm11801-201ENSMUST00000117807 746 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 Gm11246-201ENSMUST00000120880 345 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Gm23045-201ENSMUST00000175041 96 ntBASIC10.96□□□□□ -0.66
Shank1D3YZU1 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shank1D3YZU1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms