Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Chd6A3KFM7 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC9.84□□□□□ -0.84
Chd6A3KFM7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Chd6A3KFM7 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.84□□□□□ -0.84
Chd6A3KFM7 Gm5714-201ENSMUST00000197343 566 ntBASIC9.84□□□□□ -0.84
Chd6A3KFM7 AC124613.1-201ENSMUST00000198711 88 ntBASIC9.84□□□□□ -0.84
Chd6A3KFM7 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Chd6A3KFM7 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Chd6A3KFM7 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Chd6A3KFM7 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.84□□□□□ -0.84
Chd6A3KFM7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm24934-201ENSMUST00000103764 111 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm15982-201ENSMUST00000121681 554 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Mir1941-201ENSMUST00000157834 83 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm5267-201ENSMUST00000191574 1045 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm5451-201ENSMUST00000080545 579 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm11736-201ENSMUST00000121468 505 ntBASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chd6A3KFM7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm19863-201ENSMUST00000192480 2218 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms