Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc112A0AUP1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Gm24548-201ENSMUST00000158650 108 ntBASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Gm16379-201ENSMUST00000161469 348 ntBASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Gm8762-201ENSMUST00000193486 339 ntBASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc112A0AUP1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc112A0AUP1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Ccdc112A0AUP1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms