Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PdfS4R2K0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.43□□□□□ -0.9
PdfS4R2K0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.43□□□□□ -0.9
PdfS4R2K0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.43□□□□□ -0.9
PdfS4R2K0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.43□□□□□ -0.9
PdfS4R2K0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.43□□□□□ -0.9
PdfS4R2K0 Gm29608-201ENSMUST00000190444 463 ntBASIC9.43□□□□□ -0.9
PdfS4R2K0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.43□□□□□ -0.9
PdfS4R2K0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.43□□□□□ -0.9
PdfS4R2K0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PdfS4R2K0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.42□□□□□ -0.9
PdfS4R2K0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm15429-201ENSMUST00000151268 798 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm27892-201ENSMUST00000185017 106 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm44397-201ENSMUST00000195950 113 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm6983-201ENSMUST00000214912 628 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
PdfS4R2K0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.42□□□□□ -0.9
PdfS4R2K0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms