Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm11930-201ENSMUST00000117788 190 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 AA914427-201ENSMUST00000193194 1166 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm38317-201ENSMUST00000195564 343 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Rps4l-202ENSMUST00000204242 789 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm8712-201ENSMUST00000221090 701 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm26035-201ENSMUST00000083065 308 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Phf1Q9Z1B8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Gm13097-201ENSMUST00000210722 397 ntBASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Phf1Q9Z1B8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms