Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn9Q9Z0S7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Gm25043-201ENSMUST00000158604 212 ntBASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn9Q9Z0S7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn9Q9Z0S7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 AY702102-202ENSMUST00000194651 1173 ntBASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gm42693-201ENSMUST00000196779 631 ntBASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gm35960-201ENSMUST00000202712 767 ntBASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.77□□□□□ -0.53
Cldn9Q9Z0S7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms