Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Gm12058-201ENSMUST00000118614 437 ntBASIC13.72□□□□□ -0.21
AmfrQ9R049 Gm13736-201ENSMUST00000119272 253 ntBASIC13.72□□□□□ -0.21
AmfrQ9R049 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.72□□□□□ -0.21
AmfrQ9R049 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.72□□□□□ -0.21
AmfrQ9R049 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.72□□□□□ -0.21
AmfrQ9R049 Gm6334-201ENSMUST00000207083 228 ntBASIC13.72□□□□□ -0.21
AmfrQ9R049 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.72□□□□□ -0.21
AmfrQ9R049 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.72□□□□□ -0.21
AmfrQ9R049 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.72□□□□□ -0.21
AmfrQ9R049 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.72□□□□□ -0.21
AmfrQ9R049 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.72□□□□□ -0.21
AmfrQ9R049 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.72□□□□□ -0.21
AmfrQ9R049 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
AmfrQ9R049 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AmfrQ9R049 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.71□□□□□ -0.21
AmfrQ9R049 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
AmfrQ9R049 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Map1b-203ENSMUST00000223725 2669 ntBASIC13.71□□□□□ -0.21
AmfrQ9R049 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.71□□□□□ -0.21
AmfrQ9R049 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.71□□□□□ -0.21
AmfrQ9R049 Gm2991-201ENSMUST00000173338 480 ntBASIC13.71□□□□□ -0.21
AmfrQ9R049 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
AmfrQ9R049 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.71□□□□□ -0.21
AmfrQ9R049 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.71□□□□□ -0.21
AmfrQ9R049 Gm5950-201ENSMUST00000213337 772 ntBASIC13.71□□□□□ -0.21
AmfrQ9R049 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
AmfrQ9R049 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.71□□□□□ -0.21
AmfrQ9R049 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
AmfrQ9R049 Gm22058-201ENSMUST00000083393 310 ntBASIC13.71□□□□□ -0.21
AmfrQ9R049 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
AmfrQ9R049 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AmfrQ9R049 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
AmfrQ9R049 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AmfrQ9R049 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AmfrQ9R049 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AmfrQ9R049 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
AmfrQ9R049 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AmfrQ9R049 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.71□□□□□ -0.22
AmfrQ9R049 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AmfrQ9R049 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AmfrQ9R049 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AmfrQ9R049 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.7□□□□□ -0.22
AmfrQ9R049 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Gm8018-201ENSMUST00000173536 789 ntBASIC13.7□□□□□ -0.22
AmfrQ9R049 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.7□□□□□ -0.22
AmfrQ9R049 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AmfrQ9R049 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.7□□□□□ -0.22
AmfrQ9R049 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms