Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm4034-201ENSMUST00000187674 480 ntBASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm29199-201ENSMUST00000187766 775 ntBASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gm14017-201ENSMUST00000121934 386 ntBASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf3Q9QXK7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Mir433-201ENSMUST00000093564 124 ntBASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf3Q9QXK7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms