Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtp4Q9ER80 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rtp4Q9ER80 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm12849-201ENSMUST00000120013 739 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm26461-201ENSMUST00000175064 290 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm44405-201ENSMUST00000198952 126 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.52□□□□□ -0.57
Rtp4Q9ER80 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm12058-201ENSMUST00000118614 437 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm25043-201ENSMUST00000158604 212 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm45186-201ENSMUST00000206874 478 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Gm45925-201ENSMUST00000218882 744 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtp4Q9ER80 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms