Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.1■□□□□ 0.17
U2af1Q9D883 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC16.1■□□□□ 0.17
U2af1Q9D883 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Gm18782-201ENSMUST00000209023 1399 ntBASIC16.1■□□□□ 0.17
U2af1Q9D883 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.09■□□□□ 0.17
U2af1Q9D883 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC16.09■□□□□ 0.17
U2af1Q9D883 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.09■□□□□ 0.17
U2af1Q9D883 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.09■□□□□ 0.17
U2af1Q9D883 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
U2af1Q9D883 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC16.09■□□□□ 0.17
U2af1Q9D883 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
U2af1Q9D883 Cog3-203ENSMUST00000227473 4197 ntBASIC16.08■□□□□ 0.17
U2af1Q9D883 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC16.08■□□□□ 0.17
U2af1Q9D883 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
U2af1Q9D883 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
U2af1Q9D883 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
U2af1Q9D883 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.08■□□□□ 0.17
U2af1Q9D883 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
U2af1Q9D883 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
U2af1Q9D883 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
U2af1Q9D883 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
U2af1Q9D883 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.08■□□□□ 0.16
U2af1Q9D883 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm29615-201ENSMUST00000185371 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm28224-201ENSMUST00000186078 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm29001-201ENSMUST00000186177 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm28292-201ENSMUST00000186593 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm28101-201ENSMUST00000187608 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm29076-201ENSMUST00000187689 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm28302-201ENSMUST00000187931 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm28646-201ENSMUST00000188220 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm28205-201ENSMUST00000189177 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm29032-201ENSMUST00000189797 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm28695-201ENSMUST00000190300 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm37448-201ENSMUST00000192795 697 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.08■□□□□ 0.16
U2af1Q9D883 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
U2af1Q9D883 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
U2af1Q9D883 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16.08■□□□□ 0.16
U2af1Q9D883 AC154671.1-201ENSMUST00000228617 1578 ntBASIC16.08■□□□□ 0.16
U2af1Q9D883 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.08■□□□□ 0.16
U2af1Q9D883 Gm29100-201ENSMUST00000187564 4410 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms