Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm13315-201ENSMUST00000120376 991 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gm3890-201ENSMUST00000182416 207 ntBASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp4cQ9D7F7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Chmp4cQ9D7F7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Gm27243-201ENSMUST00000183964 521 ntBASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp4cQ9D7F7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms