Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Gm13453-201ENSMUST00000118708 357 ntBASIC12.37□□□□□ -0.43
Sf3a3Q9D554 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Gm24513-201ENSMUST00000174964 138 ntBASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Gm35960-201ENSMUST00000202712 767 ntBASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3a3Q9D554 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm21854-201ENSMUST00000179901 471 ntBASIC12.36□□□□□ -0.43
Sf3a3Q9D554 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm38223-201ENSMUST00000194484 695 ntBASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm44069-201ENSMUST00000204898 506 ntBASIC12.36□□□□□ -0.43
Sf3a3Q9D554 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.36□□□□□ -0.43
Sf3a3Q9D554 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.36□□□□□ -0.43
Sf3a3Q9D554 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms