Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm12165-201ENSMUST00000117047 342 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm12501-201ENSMUST00000119163 529 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm13408-201ENSMUST00000119822 798 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm7722-201ENSMUST00000120646 741 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm12196-201ENSMUST00000120954 262 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm13935-201ENSMUST00000121859 798 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Gm4607-201ENSMUST00000206649 577 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Ntng1-201ENSMUST00000051253 327 ntBASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Stag1Q9D3E6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Stag1Q9D3E6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm23251-201ENSMUST00000103773 110 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms