Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy3Q9D394 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy3Q9D394 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy3Q9D394 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy3Q9D394 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm10434-201ENSMUST00000101158 471 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm4986-201ENSMUST00000119731 549 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm28882-201ENSMUST00000185504 314 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm37424-201ENSMUST00000191727 561 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm5950-201ENSMUST00000213337 772 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm9823-201ENSMUST00000051212 327 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.35□□□□□ -0.11
Rufy3Q9D394 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.35□□□□□ -0.11
Rufy3Q9D394 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.34□□□□□ -0.11
Rufy3Q9D394 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.34□□□□□ -0.11
Rufy3Q9D394 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.34□□□□□ -0.11
Rufy3Q9D394 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy3Q9D394 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rufy3Q9D394 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.33□□□□□ -0.11
Rufy3Q9D394 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rufy3Q9D394 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rufy3Q9D394 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.33□□□□□ -0.11
Rufy3Q9D394 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.33□□□□□ -0.11
Rufy3Q9D394 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.33□□□□□ -0.11
Rufy3Q9D394 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Gm25214-201ENSMUST00000104573 129 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 Gm14832-201ENSMUST00000121289 322 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Mospd4-201ENSMUST00000180618 576 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 Gm43118-201ENSMUST00000199149 775 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.33□□□□□ -0.12
Rufy3Q9D394 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rufy3Q9D394 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms