Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps28Q9D1C8 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.58□□□□□ -0.39
Vps28Q9D1C8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps28Q9D1C8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm13665-201ENSMUST00000120830 528 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm44651-201ENSMUST00000207343 372 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gzmn-202ENSMUST00000225535 989 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.57□□□□□ -0.4
Vps28Q9D1C8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps28Q9D1C8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps28Q9D1C8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps28Q9D1C8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps28Q9D1C8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.56□□□□□ -0.4
Vps28Q9D1C8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms