Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm24231-201ENSMUST00000104315 133 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm15236-201ENSMUST00000117309 379 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm14832-201ENSMUST00000121289 322 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm44967-201ENSMUST00000207047 631 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ssbp3Q9D032 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm24845-201ENSMUST00000158034 109 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm2383-201ENSMUST00000181461 807 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm29199-201ENSMUST00000187766 775 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 AA914427-201ENSMUST00000193194 1166 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm44651-201ENSMUST00000207343 372 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms