Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.58□□□□□ -0.4
Ddx47Q9CWX9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Mir6977-201ENSMUST00000184960 64 ntBASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Mir7654-201ENSMUST00000185082 70 ntBASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Syt7-204ENSMUST00000223586 1344 ntBASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Ddx47Q9CWX9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 BC043934-202ENSMUST00000185694 2356 ntBASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx47Q9CWX9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms