Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm23912-201ENSMUST00000104687 87 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm24398-201ENSMUST00000157870 109 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm8531-201ENSMUST00000188319 893 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm9111-201ENSMUST00000219394 709 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm25063-201ENSMUST00000104666 94 ntBASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm15207-201ENSMUST00000119259 442 ntBASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm44158-201ENSMUST00000203881 505 ntBASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldnd1Q9CQX5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms