Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retreg3Q9CQV4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retreg3Q9CQV4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retreg3Q9CQV4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retreg3Q9CQV4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retreg3Q9CQV4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retreg3Q9CQV4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retreg3Q9CQV4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gm24548-201ENSMUST00000158650 108 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gm29199-201ENSMUST00000187766 775 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gm38241-201ENSMUST00000192641 898 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gm43133-201ENSMUST00000197472 463 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 AL589696.1-201ENSMUST00000225711 330 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 AC147628.1-201ENSMUST00000228193 688 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gpr87-201ENSMUST00000056898 1080 ntBASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retreg3Q9CQV4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Mir877-201ENSMUST00000104738 85 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm26083-201ENSMUST00000157904 193 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm27516-201ENSMUST00000184237 98 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Mir8109-201ENSMUST00000184375 117 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm42710-201ENSMUST00000200608 985 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm18056-201ENSMUST00000207670 568 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm18061-201ENSMUST00000208350 562 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm18063-201ENSMUST00000208529 568 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm18052-201ENSMUST00000208750 559 ntBASIC12.68□□□□□ -0.38
Retreg3Q9CQV4 Gm17910-201ENSMUST00000211038 838 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms