Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa3Q9CQ71 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa3Q9CQ71 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Mir8109-201ENSMUST00000184375 117 ntBASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Cts7-204ENSMUST00000225321 1257 ntBASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa3Q9CQ71 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm14832-201ENSMUST00000121289 322 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm31256-201ENSMUST00000194705 506 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm44364-201ENSMUST00000198368 141 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm45331-201ENSMUST00000209868 554 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm45865-201ENSMUST00000211815 945 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rpa3Q9CQ71 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa3Q9CQ71 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms