Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm16296-201ENSMUST00000159905 325 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm17420-201ENSMUST00000164753 153 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm8738-201ENSMUST00000172606 329 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm38002-201ENSMUST00000193255 180 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm18054-201ENSMUST00000207539 555 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm27572-201ENSMUST00000183702 255 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm43133-201ENSMUST00000197472 463 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm45880-201ENSMUST00000213041 853 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm10478-201ENSMUST00000084451 396 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.01□□□□□ -0.49
Trim16Q99PP9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim16Q99PP9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Gm12502-201ENSMUST00000120197 444 ntBASIC12□□□□□ -0.49
Trim16Q99PP9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12□□□□□ -0.49
Trim16Q99PP9 Gm24548-201ENSMUST00000158650 108 ntBASIC12□□□□□ -0.49
Trim16Q99PP9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12□□□□□ -0.49
Trim16Q99PP9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms