Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm14539-201ENSMUST00000117527 174 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm13736-201ENSMUST00000119272 253 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.25□□□□□ -0.45
Trim33Q99PP7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim33Q99PP7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm10434-201ENSMUST00000101158 471 ntBASIC12.24□□□□□ -0.45
Trim33Q99PP7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm27501-201ENSMUST00000183599 107 ntBASIC12.24□□□□□ -0.45
Trim33Q99PP7 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm10608-202ENSMUST00000213924 676 ntBASIC12.24□□□□□ -0.45
Trim33Q99PP7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Gm7046-201ENSMUST00000221351 977 ntBASIC12.24□□□□□ -0.45
Trim33Q99PP7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim33Q99PP7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms